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Ultra-Long Read Nanopore Sequencing

Full-length 16S / WGS / Direct RNA Sequencing. Uncover structural variants, complex repeats, and access native base modifications.

Workflow / Steps

1

Basecalling

Guppy/Dorado GPU basecalling for high Q-scores and native modification calling.

2

Assembly

Flye, Canu, Miniasm, and Medaka for high-accuracy long-read polishing.

3

Advanced Analysis

Structural variant calling (Sniffles), isoform detection, methylation profiling & AMR.

4

Deliverables

Publication-ready graphics, fully annotated genomes, FASTQ, BAM, and interactive reports.

Ultra-Long Reads

Resolve assembly of full complex genomes, map structural variations, and uncover sequences hidden in short-read data.

Real-Time Analysis

Rapid identification of AMR (Antibiotic Resistance) genes, pathogen detection, and fast environmental screening.

Native Sequencing

Sequence native DNA & RNA without PCR amplification, keeping base modifications intact (e.g. Methylation).

Our Nanopore Platforms

MinION Mk1C

Portable & Rapid Portable, rapid turnaround for small genomes and amplicon sequencing.

GridION

High-Throughput Benchtop Ideal for bacterial genomes, RNA-Seq, and small eukaryotes (up to 5 flow cells).

PromethION 2 (P2I)

Maximum Yield High-capacity automation for large plant/human genomes and complex cancer genetics.

Comprehensive Nanopore Solutions

Full-length 16S rRNA Metagenomics (V1-V9)

Higher resolution than traditional short-read V3-V4 for precise species-level identification.

Direct RNA Sequencing & Long-Read Transcriptomics

Sequence full-length RNA isoforms, alternative splicing events, and RNA base modifications without cDNA bias. • Detect alternative splicing • Identify novel isoforms • Map RNA modifications directly

Long-Read Whole Genome Sequencing

De novo assembly, gap closing, and T2T (Telomere-to-Telomere) assembly of complex genomes.

Plasmid / Virus / Phage Sequencing

Rapid, full-length circular assembly for vector verification and virology research.

Nanopore Long-Read vs Traditional Short-Read

FeatureNanopore Long-ReadShort-Read (Illumina)
Read LengthUp to 4 Mb+150-300 bp
Structural Variants (SVs) & RepeatsExcellentLimited
Epigenetics (Methylation)Native (Direct DNA/RNA)Requires Bisulfite Conversion
De novo Assembly ContiguityHighly contiguous (T2T)Fragmented
Real-time AnalysisYesNo
Ultra-Long Read Nanopore Sequencing — Yaazh Xenomics